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I love the idea of this. Unfortunately, while I understand what I'm trying to do, I did have a lot of difficulty working out how the phenotypes mix together. 

Thank you :D
I know that understanding the genes can be difficult if your not in my head ^^.
I wanted the player to find by himself how the genes work together. However, because I also wanted the player to build one specific phenotype, it made the game way more confusing than what I wanted.
With hindsight, I should have done levels or tutorials to teach to the player how the genes work, before the puzzles.
Thanks for your feedback ! It confirms my thoughts on this issue :D