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It seems like it happens after the second step of a multiple automatic thing, like,
1. I make a move
2. some pieces clear
3. more pieces appear
4. those pieces clear
5. now I can move the cursor and move pieces
6. the pieces that should have appeared after step 4, appear, but I'm already moving around and changing things

I'm trying to avoid doing this for now because I'm in the middle of a nice run, but if I wind up game-overing I'll start a run just for fun and see if I can get video or something

Thanks for the steps! I'll see if I can reproduce and fix it.

I do want to clarify -- I'm not certain I have those steps right, that's just how it seems to happen.  I'll check back in if I have something that reproduces it for sure.

I'm pretty sure I found what was causing it, as well as the other issue you mentioned. I'm working on a 1.2.0 update that will include fixes for that along with a bunch of other improvements. Thanks again for reporting both of them.