Wow, thats really unusual theme interpretation.
I didn't get it. But anyway get you all my best regards.
Viewing post in AtomBox - Physics Simulator jam comments
It's quite an abstract interpretation of the theme but it does simulate particle physics so I guess it can be classed as a simulator. Thank you for trying it anyway!
(edit): if you didn't get how to use the software, the included manual contains the instructions on how to actually use it and what buttons to use.