Have you tried setting a course and launching anyway ignoring the open engine panel, rear door and the damage lights?
I'm pretty sure I was at the same point then picked the next destination and launched.
Good suggestion, I sort of remember being surprised that I could launch during the last beta version.
I checked and the Navigation button and the Launch button seem to be inaccessible (red/black caution stripe) so I can't seem to launch.
When I check System I get all the lights at the top to blink red, the fuel indicator seems to be blinking red, and one of the engines blinks red (open hatch)? At the least the crapolytic converter is coming up green.
Hah - it's definitely bugged. So I used the FUBER app to go to the asteroid and then back - and went back into the ship - and suddenly Scraps is in there mentioning Angie's Fist thing - so I thought, "Oh, should work now?" But nope - ship still shows messed up - undoubtedly because the bad cables are still in the inventory.