Hey there, thanks for the report! Does it do this for you if you update the plugins in the vanilla project? I tried for myself and it still seems to work in the original project files. :o
Make sure when you add the new versions of the plugins into the project, don't delete the old entries in the Plugin Manager, you need to right click them and click "Refresh" to update them to the latest version. If the tilled soil isn't showing up, I think it might be because the old settings were deleted. :D