I got stuck on that second room. I only noticed I got locked after I solved the circuit puzzle in that room, went to the door, realizing it was blocking me... and then I noticed the missing cubes...
Ah I see the problem, you have to click the blue fullscreen button and not the other one! I must've added it by accident so I removed that full screen button!
Ok, fullscreen works as intended. However, I'm still stuck at that particular room - I only see 4 triggers in total, yet there are 5 laser gates blocking me...