I used ezgif.com to create a sprite and the order seems to be a sprite sheet standard of

left to right top to bottom

A  B  C  D  E

F  G  H  I J

It was strange that the quads are being read from bottom left frame going left to right, bottom to top.

How can I make a quad use this ordering? A follow up question is what program do you use to create sprite sheets that read in this ordering?

Quad ordering works as detailed here: https://itch.io/post/1593063

It goes bottom-left to top-right since that's the direction texture UVs use! You're going to have to use a program like aseprite or photoshop to edit your sprite sheets, or alternatively just use one sprite per sheet, or put everything in one row.