Yeah. It was on the list. I wanted to redo the map so it was more zoomed out so the main base ship was always visible. Ran out of time.
Also there's a bug where the map icon for the main ship isn't showing in the uploaded build. Probably part of why you couldn't find the main ship. Its showing in the Unity editor when I test though, so need to resolve that.
edit: Found the above bug, the blinking animation doesn't play properly in the WebGL build, so it's 50/50 if it'll be visible or not when you pause the game. I will fix and upload v1.2 tonight.