The game was really good!, At first (like my first four attempts), I could'nt understand what i was supposed to do, so I ended up checking the spoiler section for a hint. Once I figured out one puzzle, though, everything clicked and the game flowed really well for me.
The thing that confused me the most at first was that the reference module also contains reference panels (I probably didn't notice the "n//" in the code block), but as I said, once I understood how it worked, everything made sense.
I honestly don't have anything else to mention. To me, this basically feels like a complete game rather than a game jam project. Great job!