Again let me repeat and emphasize "A tool that actually works 100% of the time" Sadly doing it with QGO doesn't work either(not sure if it ever did, but last time I tried it failed), it creates the right directories but they are empty the files don't get copied... :((((((((((((
Never tried/used SIdequest now that you mention it and it looks like they have a Linux version too(yaaay!) so maybe I'll give it a try at some point, but I wouldn't hold my breath for it working... :/