Well, if you really want to get those numbers back....
You can enable debug mode and renpy CLI by putting the following code in a file named debug.rpy in the folder named "game" inside the installation. The code :
init 999 python:
config.developer = True
config.console = True
Then restart the game and press Shift+D for debug menu and choose "variable viewer".
Now find variables for your flower counts.
Close the viewer and press Shift+O for renpy CLI. Now assign whatever number you want to those variables by typing "variablename = whatever number". For example, if variable for red flower is redflow, you can type redflow = 2304 to get 2304 red flowers in game.
NOTE : I'm not taking responsibility if you break something by messing up above instructions. Follow at your own risk.