To anyone using a Switch Pro controller to play this game on Windows, be sure to go into joy.cpl/Game Controllers on Windows and calibrate your joysticks. Had an issue where the axis was only going 80% of the way on the movement end and couldn't cross gaps in-game due to this issue.
Also I had the controller calibrated through steam but this game doesn't recognize the controller if you enable "Switch Pro Controller support". This is a factor regardless of having the game running through steam with its overlay.
As for other workaround for Switch Pro Controller users, I had to do manually binding for many of the controls for confort but for skins, 1 that I find matches up well enough is the "Rockfire PSX-USB Bridge" icon skin.