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how do you save your progress in this game on an android device? I’ve been using the puffin browser to play. I was playing for a couple hours and my progress got deleted. I simply have no idea how to keep a back up file for this game. If anybody could help me out, it’d be greatly appreciated. 

You don't.  Puffin doesn't save your flash SOL files anywhere that is regularly accessible, and Puffin assigns you the use of a random server in their cloud for the content.  There's no way to *save* the progress when using Puffin.