Gahhhhh there is so much here. Like great job... but wow. So here are a few thoughts I had while reading:
- The illustrations are so derpy... they great.
- I feel like the system could be less crunchy and accomplish the same thing. If you plan on editing, trim the fat.
- The missions you included--GREAT! And actually a really nice way to set tone.
- And I liked all the random tables. Well done!